Scientific Dissemination
📰 Featured publications
Multi-scale early warning system for influenza A spillovers Alfonsi T., Bernasconi A., Chiara M., Ceri S. Pre-print manuscript, BiorXiv, 2025.
A codon usage-based approach for the stratification of Influenza A Alfonsi T., Chiara M., Bernasconi A. Pre-print manuscript, ResearchSquare, 2024.
Data-driven recombination detection in viral genomes Alfonsi T., Bernasconi A., Chiara M., Ceri S. Nature Communications, vol. 15, n. 3313, 2024
ConvMut: A Web tool to analyze viral convergent mutations along phylogenies Bernasconi A., Fanfoni E., Alfonsi T., Focosi D. Pre-print manuscript, BioRxiv, 2024
CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay Alfonsi T., Al Khalaf R., Ceri S., Bernasconi A. Scientific Data, vol. 9, n. 260, 2022, pp. 1-12
Genomic data integration and user-defined sample-set extraction for population variant analysis Alfonsi T., Bernasconi A., Canakoglu A., Masseroli M. BMC Bioinformatics, vol. 23, n. 401, pp. 1-33
🙋♂️ Conferences
- IEEE International Conference on Big Data Computing Service and Machine Learning Applications (IEEE BigDataService), 2023 & 2024; Member of Program Commitee
- Doctoral Achievements, Colloquia Doctoralia 2022, Milan, Italy
- Viral Genomics Conference 2022, Hinxton, England
- Declarative AI: International Joint Conference on Rules and Reasoning (RuleML+RR) 2022, Berlin, Germany
- 13th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS), Leiden, Netherlands
- 15th Research Challenges in Information Science (RCIS), Limassol, Cyprus
If interested, I invite you to check my Google Scholar profile!
🔍 Featured Collaborators
- Prof. Ilaria Capua, Senior Fellow of Global Health, Johns Hopkins University, Baltimore
- MD Daniele Focosi, Pisa University Hospital
- Prof. Stefano Ceri, Full Professor, Politecnico di Milano
👨🏫 Teaching
- Python programming for the MSs in Bioinformatics and Computational Genomics
- C and Matlab programming in the BSs in Mechanical Engineering
🏅 Awards
- 2024 Chorafas award for the extraordinary scientific achievements in computers and communications technology